How healthy soil cover can help the harvest in drought conditions caused by El Niño
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Food For Mzansi
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How healthy soil cover can help the harvest in drought conditions caused by El Niño

When rainfall ceases, the soil acts as the farm's first line of defense. With the return of El Niño, agricultural scientists, including Dr. Lehlogonolo Mathelele, Sitembiso Fakude, Adolph Malatji, Nompumelelo Ngejane, and Humble Sirakalaala, emphasize the critical importance of building organic matter in the soil and improving the soil's water retention capacity for survival during dry periods.

While farmers often look to the sky awaiting rain, the real battle may be happening right under their feet. Soil functions as the farm's primary reservoir, accumulating water, retaining nutrients, supporting roots, and providing the biological foundation for crop growth. Healthy soil significantly increases the chances of a harvest surviving drought, whereas degraded soil can turn even a short period without precipitation into a crisis.

Therefore, the return of El Niño should be viewed not only as a weather phenomenon but also as a soil fertility issue. El Niño is a natural climatic event caused by abnormally warm surface water in the central and eastern Pacific Ocean. Although it originates thousands of kilometers from Africa, it is capable of disrupting temperature and precipitation patterns worldwide. While the consequences vary by region, South Africa has historically faced reduced rainfall during certain periods of the main growing season during El Niño events.

In 2026, farmers have another reason to pay attention to this situation. The Food and Agriculture Organization of the United Nations (FAO) reports the formation of a new El Niño phase, with risks of agricultural drought being particularly high in some areas of Southern Africa and other vulnerable regions. FAO has identified certain agricultural and pastoral zones where the probability of drought exceeds 50%.

It is easy to mistakenly believe that soil fertility is solely about the amount of fertilizer applied to the field. However, the concept of fertility is much broader. FAO defines soil fertility as the soil's ability to support plant growth by supplying necessary nutrients while providing suitable physical, chemical, and biological conditions for plants.

Fertile, healthy soil performs an extremely valuable function during drought: it helps crops use available water more efficiently. Organic matter, good soil structure, biological activity, and adequate nutrient availability collectively contribute to soil productivity. Soil with good structure allows water to infiltrate rather than simply run off the field, and it stores water in zones accessible to plant roots.

Conversely, degraded soil can form a crust, become compacted, or lose organic matter. Rainwater can quickly run off, carrying away valuable topsoil and nutrients. When a dry spell arrives, the crop is left with fewer water reserves and weaker root development, creating a dangerous cycle that can be exacerbated by El Niño.

When farmers hear an El Niño warning, their initial concern is naturally related to the amount of rainfall. However, drought also affects the movement and availability of nutrients. Plants require elements such as nitrogen, phosphorus, potassium, sulfur, calcium, and magnesium, as well as several micronutrients. Nevertheless, nutrients are only beneficial to the crop if the plant can absorb them.

Under severe dryness, root growth and nutrient uptake can be restricted. Consequently, the crop can suffer simultaneously from both water stress and nutrient stress. This explains why simply increasing fertilizer application is not always the solution for an El Niño season. Farmers need to adopt an efficient nutrient management approach: applying the right element in the right quantity, in the right place, and at the right time, while simultaneously improving the soil's ability to retain water and support roots.

Farmers cannot control the amount of rainfall, but they can influence what portion of that rainfall remains available for the harvest. This is where soil health practices become particularly important. Retaining crop residues on the soil surface, increasing organic matter, reducing unnecessary soil disturbance, controlling erosion, crop rotation, and incorporating legumes—all these contribute to better soil management. Integrated soil fertility management can combine organic resources, appropriate fertilizers, crop rotation, and other methods to maintain productivity while reducing nutrient losses.

For example, manure and well-composted material can replenish organic matter and nutrients. Legumes promote biological nitrogen fixation. Crop residues protect the soil surface from heat and erosion, helping to maintain soil organic matter with proper management. The goal is not just to make the soil 'rich'; the goal is to create soil capable of retaining water, preserving nutrients, and supporting root function in challenging conditions.

The best time to prepare for drought is before the drought itself. Firstly, farmers must closely monitor climate and weather warnings, utilizing seasonal forecasts, local meteorological information, and advice from agronomic services. FAO notes that El Niño can often be predicted months in advance, giving farmers the opportunity to adjust decisions before planting. It is important to understand that a global El Niño forecast should not automatically be interpreted as a prediction for every farm; local conditions are crucial.

Secondly, careful selection of crops and varieties is necessary. An El Niño season may not be the right time to take undue risks with varieties requiring a long and reliable growing period. Where locally recommended options are available, farmers can consider drought-tolerant, heat-tolerant, or shorter-duration varieties. It is also advisable to change the sowing date if seasonal forecasts indicate a delay or reduction in rainfall. FAO guidance also emphasizes drought-tolerant crops, short-cycle crops, and adjusting planting times as potential preemptive measures.

Thirdly, farmers must protect every drop of rain. Water runoff from the field is unavailable to the crop. Therefore, methods that slow runoff, reduce erosion, and improve infiltration should be implemented. Depending on the farming system, this may include maintaining ground cover, contour farming, mulching, conservation agriculture practices, terracing, or other local water harvesting techniques. The basic principle is simple: do not wait for the rain; prepare the soil so it can receive it.

Fourthly, organic matter must be built up in the soil. Returning appropriate crop residues, using manure or compost, crop rotation, and incorporating legumes help improve soil structure and nutrient cycling. This is especially important in arid regions where the soil's ability to retain and supply water can determine whether a crop survives the drought or perishes. FAO points out that maintaining soil texture and fertility can increase crop water productivity, highlighting integrated soil fertility management, manure application, crop rotation, legumes, and agroforestry as approaches that promote nutrient recovery and enhance resilience.

Fifthly, fertilizers should not be abandoned, but used more wisely. A drought warning should not automatically mean abandoning fertilizers. Poor nutrition can exacerbate drought stress, as an undernourished crop may have limited growth and reduced ability to efficiently use available water. However, decisions on fertilizer application must be based on soil condition, crop needs, expected yield potential, available moisture, and professional agronomic advice. The goal is nutrient use efficiency, not simply increasing application rates. Whenever possible, farmers should conduct soil tests to identify nutrient deficiencies and avoid wasting scarce resources on non-limiting elements.

Sixthly, livestock must be cared for alongside crops. For mixed farmers, El Niño is not just a crop problem. Reduced rainfall means less pasture, lower grazing quality, and a shortage of drinking water. Therefore, farmers should consider herd size, pasture availability, feed reserves, and water sources before conditions become critical. FAO recommends measures such as feed storage and ensuring water sources as part of early actions in areas susceptible to El Niño-related agricultural drought.

One should not wait for the first poor harvest. One of the main lessons from past El Niño events is that agricultural damage can continue long after the rains return. A failed harvest leads to reduced food, lower income, decreased resources for purchasing seeds and fertilizers, and potential reductions in animal stock for the next production cycle. FAO's analysis of the consequences of the El Niño shock in 2015/16 in Zambia showed that households affected by drought experienced a significant decline in maize yields and income. It also found that strategies such as income diversification and livestock farming, as well as agroforestry, helped mitigate some of the consequences.

El Niño is a warning, but healthy soil is a long-term investment. Farmers should not view El Niño as an isolated catastrophe that happens every few years and disappears. A more serious issue is that El Niño occurs against a backdrop of a warming climate. FAO notes that global warming can amplify the impact of El Niño by raising the baseline temperature and increasing the potential severity of heat and drought in vulnerable regions. This changes the conversation. The question is no longer: 'How do I survive this El Niño?', but rather: 'How do I make my farm more resilient to the next ten El Niño seasons and the changing climate around them?' The answer starts with the soil.

A farmer cannot summon rain, but they can improve the soil's ability to capture precipitation, retain moisture, cycle nutrients, and support strong roots. This means protecting the soil from erosion, returning organic matter, managing nutrients carefully, diversifying crops, using appropriate varieties, conserving water, monitoring weather information, and planning livestock numbers, as well as, where possible, combining farm income with other livelihoods to reduce dependence on a single harvest.

The best defense for a farmer may lie right under their feet. El Niño reminds us that agriculture is ultimately a partnership with nature. The farmer sows, but the weather decides how much rain will come. The farmer applies nutrients, but the soil determines how effectively they will be stored and made available. The farmer can install irrigation, but the water still needs to be managed wisely. Healthy soil unites these elements: it serves as a reservoir during the rain, a nutrient bank during crop growth, and a buffer when the weather is against the farmer.

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Experts urge South African farmers and households to prepare for heat stress and water scarcity due to El Niño
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Experts urge South African farmers and households to prepare for heat stress and water scarcity due to El Niño

Given forecasts suggesting that El Niño conditions could lead to 1200 deaths in the country, the South African Weather Service (SAWS) advises the public to implement water collection and storage systems to manage water needs during periods of intense heat.

These weather patterns typically cause reduced summer rainfall across South Africa, potentially increasing the risk of water shortages and placing additional strain on water resources.

El Niño is a natural climate phenomenon characterized by abnormally high sea surface temperatures in the central and eastern tropical Pacific Ocean. It influences atmospheric circulation, altering temperature and precipitation patterns globally.

According to Hannelie Dubbel from SAWS, temperatures above normal are expected over most of the country, along with more frequent heatwaves and extreme heat events. She specified that, unlike El Niño, overall fewer extreme weather events regarding precipitation are anticipated, but heat peaks usually occur in December and January.

Dubbel added that it is impossible to predict the exact timing of these events in the summer at a seasonal level, so she recommends monitoring short-term weather forecasts weekly. She also noted two events that stand out for their different impacts: the summer of 1982/3, which brought terrible drought conditions severely impacting agriculture, and the summer of 1997/8, which brought above-average rainfall in the latter half of the summer.

Although the current El Niño was trending towards exceeding these events, there was insufficient evidence to expect a more intense impact. She advised the public to track short-term forecasts and alerts from SAWS and be prepared to act upon receiving such warnings.

As the threat of El Niño raises concerns about food production due to drought, local farmers are declaring their readiness to combat the heat. A farmer from the Northwest, Seniren Naidu, urged farmers to accept reality in advance and not rely on hope. He advised against planting all the land if water is scarce, but instead intensively managing a smaller, well-mulched and irrigated area to achieve a harvest rather than an enormous field that would completely perish.

Naidu also recommended protecting the soil cover, reducing herd size in advance to match available grazing capacity before animals lose condition, and conserving funds. He grows over 50 acres of mixed vegetables, focusing on local African and exotic vegetables, and has over 15 years of experience in this field.

To measure and protect soil moisture, Naidu uses practical methods rather than digital sensors. He employs the 'feel method' by digging 15 to 30 centimeters into the root zone to check whether the soil forms a ball or crumbles. To retain this moisture, they strictly adhere to principles of conservation agriculture, loosening organic residues that keep the soil moist from decomposing material. This significantly reduces evaporation from the soil surface and maintains coolness in the root zones.

To save water under expected El Niño conditions, Naidu has always used precision irrigation. Although this requires more labor, it justifies the excessive use of water. Watering schedules were always set for early morning and late evening to combat evaporation and ensure plant uptake. Since the main crops are local African vegetables such as peas, amaranth, peanuts, and beans, most of them are already drought-resistant. However, drought-resistant varieties were lacking for leafy vegetables and other herbs.

Some crops managed to switch to earlier maturity times—from six months to four months, which significantly helped reduce water consumption. He emphasized that blindly relying on the first spring rain during an El Niño year is a trap, as it is often followed by a 'false start' leading to a long dry spell that kills young seedlings. They wait until the accumulated rainfall penetrates at least 20–30 centimeters into the soil profile. This allows the soil to remain moist longer, promoting stronger plant growth.

Naidu believes that his main defense and measures against El Niño lie in diversifying farm activities and maximizing water harvesting. They cleared drainage ditches and started pumping silt from dams. Furthermore, they strictly control weeds, as weeds are greedy competitors that steal scarce water and nutrients from main crops. When asked about plans for heat, Naidu stated that he strategically planned to focus on harvesting rather than planting from the peak of El Niño until its decline. Nevertheless, he noted that the snowball effect will hit them next season, but there is no firm way out of this reality in agriculture, and most importantly, it is budgeting and saving reserves to continue operations in the foreseeable future.

Farmer Donovan Gumede from Durban stated his readiness for expected heatwaves. They recently built a new borehole and installed two 10,000-liter tanks to ensure a sufficient water supply for irrigation. They have also adopted a new irrigation method: cutting plastic bottles and placing them on plants, which facilitates soil moisture retention and helps conserve water. Gumede advised other farmers to develop water-saving irrigation methods, warning against using spray sprinklers as they waste water, and insisting on securing adequate water sources before expected heatwaves.

Visane Mavasa, a representative of the Department of Water and Sanitation (DWS), pointed out that historically, El Niño conditions are often linked to below-average rainfall, drought, agricultural losses, and increased water stress.

DWS has implemented a risk assessment approach to early detection, evaluation, and management of potential impacts on water resources and services. Monitoring focuses on rainfall and catchment basin conditions, river flows and dam inflows, as well as national and system-specific dam storage levels. The National Disaster Management Centre (NDMC) issued an El Niño advisory for disaster management stakeholders in July 2026, calling for strengthening drought preparedness and response measures, including reviewing contingency plans, resilience initiatives, risk reduction measures, and public awareness.

Mavasa reported that in August, DWS held meetings with key stakeholders, including the Agricultural Research Council (ARC), water boards, catchment management agencies, municipalities, and the agricultural sector, to strengthen preparedness and coordinate measures to mitigate potential drought impacts. These meetings focused on water system utilization, water availability, distribution, and supply management measures to support sustainable management of existing water resources.

The El Niño-Southern Oscillation (ENSO) Reference Group, comprising climatologists, researchers, and institutional experts, including representatives from SAWS, ARC, universities, and CSIR, provides scientific assessment, monitoring, forecasting, and consultation on potential ENSO-related impacts. The ENSO Summit 2026/27 took place on September 26.

Mavasa stated that the department will continue to monitor water availability and manage water use allocation according to approved system operating rules and prevailing hydrological conditions. Unfortunately, municipal water distribution systems in the metropolitan areas of Gauteng and eThekwini remain highly vulnerable to sharp spikes in demand due to heatwaves. Progress in reducing per capita consumption of non-commercial water and physical losses or leaks in these municipalities is minimal, and investments in storage capacity and pumping remain insufficient. In Gauteng and eThekwini, the average daily per capita water consumption remains around 250 liters, which is higher than the global average of 173 liters.

According to the Department of Water Resources data, in Gauteng, non-commercial water accounts for about 47 percent, and physical losses account for 27 percent. In eThekwini, non-commercial water reaches about 56 percent, and physical losses reach 40 percent. Mavasa highlighted the high risk that expected hotter and drier conditions associated with El Niño could intensify seasonal demand peaks, thereby increasing the risk of prolonged water supply interruptions in Gauteng and eThekwini between October 2026 and March 2027.

DWS sets abstraction limits for water boards and other authorized water users. These limits are set at a level ensuring continuous and stable water supply under most drought conditions. Mavasa explained that limits are gradually reduced when monitoring shows that water resources are under significant stress or severe drought conditions develop.

She advised municipalities to immediately implement water consumption restrictions, as recommended by DWS and water boards, to avoid prolonged water supply interruptions this summer, and to ensure their effective enforcement. Municipalities must also effectively inform residents about the importance of reducing demand. The key question is whether municipalities can fix leaks in distribution systems, reduce average daily per capita water consumption, and promptly introduce and enforce usage restrictions if necessary.

For the agricultural sector, preparing for the El Niño dry season means managing water as a limited resource from the outset, rather than waiting for scarcity to strike. Mavasa advises farmers to closely monitor dam levels, boreholes, soil moisture, and rainfall forecasts. Daily decisions should focus on efficient water use, prioritizing high-value crops, repairing leaks, and reducing unnecessary irrigation. She added that farmers should begin preparing now for the intensive implementation of water conservation and water demand management measures.

Agricultural producers and municipalities prepare for heat stress and water scarcity due to El Niño
Read more
iol.co.za

Agricultural producers and municipalities prepare for heat stress and water scarcity due to El Niño

In light of forecasts suggesting that El Niño conditions could lead to 1200 deaths in the country, the South African Weather Service (SAWS) recommends that the public implement water collection and storage systems to manage water needs during periods of intense heat.

These climatic conditions typically cause reduced summer rainfall across South Africa, potentially increasing the risk of water shortages and placing additional strain on water resources.

El Niño is a natural phenomenon associated with abnormally high sea surface temperatures in the central and eastern tropical Pacific Ocean. It influences atmospheric circulation, altering temperature and precipitation patterns globally.

According to Hannelie Dubbel from SAWS, above-average temperatures with more frequent heatwaves and extreme heat events are expected across most of the country. She noted that, unlike El Niño, overall fewer extreme weather events regarding precipitation are anticipated, but the peak heat is expected in December and January.

Dubbel emphasized that seasonal forecasts do not allow for precise timing of these events during the summer, so she advises monitoring short-term weather forecasts weekly. She cited past seasons as examples: the summer of 1982/83 brought terrible drought conditions that severely impacted agriculture, whereas the summer of 1997/98 brought above-average rainfall in the latter half of the summer.

Although the current El Niño has the potential to surpass these events, Dubbel added that there is insufficient evidence to expect a more intense impact.

She advised the public to track short-term forecasts and alerts from SAWS and to be prepared to act upon receiving warnings.

As the threat of El Niño raises concerns about food production due to drought, local farmers are declaring their readiness to cope with the heat. A farmer from the North West, Seniren Naidu, urged agriculturalists to face reality early and not rely on hope. He advised against planting all the land if water is scarce, but instead intensively managing a smaller, well-mulched and irrigated plot to achieve a harvest rather than an enormous field that would completely perish.

Naidu also recommended protecting the soil cover, reducing herd size in advance to match available pasture capacity before animals lose condition, and conserving funds. He grows over 50 acres of mixed vegetables, focusing on local African and exotic crops, and has been working in this field for over 15 years.

To measure and protect soil moisture, Naidu uses practical methods rather than digital sensors. He employs the 'feel method' by digging 15–30 centimeters into the root zone to check whether the soil forms a ball or crumbles. To preserve this moisture, they strictly adhere to conservation agriculture principles, returning organic matter that keeps the soil moist.

He noted that this significantly reduces evaporation from the soil surface and maintains coolness in the root zones. To conserve water under the expected El Niño, Naidu has always used precision irrigation. Although this requires more manual labor, it justifies itself compared to excessive water use. Watering schedules were always set for early morning and late evening to combat evaporation and ensure plant uptake. Since the main crops are local African vegetables such as peas, amaranth, peanuts, and beans, most of them are already drought-resistant.

However, he stated that among leafy vegetables and herbs, there were no drought-resistant varieties. On some crop lines, they managed to switch to earlier maturity times—from six months to four months, which significantly helped reduce water consumption. Naidu warned that blindly relying on the first spring rain during an El Niño year is a trap, as it is often followed by a 'false start' leading to a long period of drought that destroys young seedlings. They wait until the accumulated rainfall penetrates at least 20–30 centimeters into the soil profile, allowing the soil to remain moist longer, promoting stronger plant growth.

The main defense and measure against El Niño for Naidu has been diversifying farming activities and maximizing water harvesting. They cleared drainage ditches and began pumping silt from dams. Furthermore, they strictly control weeds, as they are greedy competitors stealing scarce water and nutrients from main crops. When asked about plans for heat, Naidu reported that he strategically planned to focus on harvesting rather than planting from the peak of El Niño until its decline. Nevertheless, he admitted that the snowball effect will fall on the next season, and there is no easy way out of this reality in agriculture; the main thing is to plan the budget and maintain reserves for further work.

Farmer Donovan Gumede from Durban stated his readiness for the expected heatwaves. He recently built a new borehole and installed two 10,000-liter tanks to ensure a sufficient water supply for irrigation. They have also adopted a new watering method: cutting plastic bottles and placing them on plants, which facilitates soil moisture retention and helps save water. Gumede advised other farmers to develop water-saving irrigation methods, cautioning against using spray sprinklers as they waste water, and insisting on securing adequate water sources before expected heatwaves.

Visane Mavasa, a representative of the Department of Water and Sanitation (DWS), pointed out that historically, El Niño conditions are often associated with insufficient rainfall, drought, losses in agricultural production, and increased water stress.

DWS has implemented a risk assessment approach to early detection, evaluation, and management of potential impacts on water resources and services. Monitoring focuses on rainfall and catchment conditions, river flows and dam inflows, as well as national and system-specific dam storage levels.

The National Disaster Management Centre (NDMC) issued an El Niño Warning for disaster management stakeholders in July 2026, calling for strengthening drought preparedness and response measures, including reviewing contingency plans, resilience initiatives, risk reduction measures, and public awareness.

Mavasa reported that in August, DWS held meetings with key stakeholders, including the Agricultural Research Council (ARC), water boards, catchment management agencies, municipalities, and the agricultural sector, to strengthen preparedness and coordinate measures to mitigate potential drought impacts.

Discussions focused on the operation of water systems, water availability, distribution, and supply management interventions to support sustainable use of available water resources. The ENSO Reference Group, comprising climatologists, researchers, and institutional experts, including representatives from SAWS, ARC, universities, and CSIR, provides scientific assessment, monitoring, forecasting, and consultation on potential ENSO-related consequences. The ENSO Summit 2026/27 took place on September 26.

Mavasa stated that the department will continue to monitor water availability and manage water allocation according to approved system operating rules and prevailing hydrological conditions. However, municipal water distribution systems in the urban areas of Gauteng and eThekwini remain highly vulnerable to sharp demand spikes due to heatwaves. Progress in reducing per capita consumption of non-commercial water and physical losses or leaks in these municipalities is minimal, and investments in storage capacity and pumping remain inadequate.

In Gauteng and eThekwini, the average daily per capita water consumption is about 250 liters, which is higher than the global average of 173 liters. According to departmental data, in Gauteng, the share of non-commercial water is about 47 percent, and physical losses are 27 percent. In eThekwini, non-commercial water reaches approximately 56 percent, and physical losses are 40 percent.

Mavasa stressed the high risk that the expected hotter and drier conditions associated with El Niño could exacerbate seasonal demand peaks, thereby increasing the likelihood of prolonged water supply interruptions in Gauteng and eThekwini between October 2026 and March 2027. DWS sets abstraction limits for water boards and other authorized water users, determined at a level ensuring continuous and stable water supply under most drought conditions. These limits are gradually reduced when monitoring indicates significant water resource stress or the development of severe drought.

She advised municipalities to immediately implement water restrictions, as recommended by DWS and water boards, to avoid prolonged water supply disruptions this summer, and to ensure their effective enforcement. Municipalities must also effectively inform residents about the importance of reducing demand. The key question is whether municipalities can fix leaks in distribution systems, reduce average daily per capita water consumption, and promptly implement and enforce water use restrictions if necessary.

For the agricultural sector, preparing for the El Niño dry season means managing water as a limited resource from the outset, rather than waiting for scarcity to occur. Mavasa advises farmers to closely monitor dam levels, boreholes, soil moisture, and rainfall forecasts. Daily decisions should focus on efficient water use, prioritizing high-value crops, repairing leaks, and reducing unnecessary irrigation. She added that farmers should begin preparing now for the intensive implementation of water conservation and water demand management measures.

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